I have many working projects where the schematic and PCB match. However if I clone the project and then without changing anything in the clone use Design -> Update PCB EasyEDA tries to remove about half the components and replace them with identical components. Even worse it sometimes places components in the wrong place, for example I saw an R9 placed where R19 was supposed to be.
Electron
2.0.5
Windows
10
EasyEDA
6.4.3