@wm8s, Can you post a screenshot to illustrate this? As I'm sure you are aware, you can of course turn off the visibility of all except the selected layer.

If you mean bottom layer pad will cover the top layer track, it is a known issue, we will fix it in the future.

Here's a shot with BottomLayer selected, and all layers except BottomLayer turned off.  This shows the bottom-layer copper pours:  Here's a shot of the same board with BottomLayer selected, and all layers except TopLayer and BottomLayer turned off.  I want to leave TopLayer visible, because when BottomLayer is selected, I still want to see the top layer stuff show through areas of the BottomLayer **_that have no copper_** (as with the TopLayer stuff that shows through the four vertical tracks on the right). **BUT** I shouldn't be able to see TopLayer component pads (copper and paste) show through BottomLayer copper pours (as happens with the TopLayer rectangular component pads): 

@UserSupport Yes, I think you're describing what I'm seeing. It works both ways: one side's pads cover the other side's copper. I'll wait for the fix. Thanks! ...R