Schematic View:
Exported PDF - Same area.
I have emailed the json file to the address you supplied.
I'd like to add further, that I have:
1) Removed the X's on three more circuits.
2) Saved schematic
3) Closed Schematic
4) opened schematic
5) Added X's back to the the three circuits affected in #1 above.
6) Saved schematic
7) closed schematic
8) opened schematic
9) exported to pdf.
Those three connections now show the same effect:
Notice, on the same schematic, this IC as to how it appears on the PDF:
Notice above how on pin 12, it's a blue X, on pin 11, it's a green X. I can assure you that in the schematic view itself, they are both green:
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